spread of the virus in host cells [11]. M2, present in minor quantities on the
membrane, is an ion channel that has an important role in early phases of the
infection. Inside the virus, each RNA segment is wrapped around nucleoprotein
(NP) monomers, forming viral ribonucleoprotein (RNP) complexes alongside with
the viral polymerases PB1, PB2 and PA. Attached to the inside of the membrane,
M1 (matrix) protein interacts with RNP complexes [8].
As mentioned before, IAVs and IBVs are responsible for influenza outbreaks
around the world. While both viruses result in similar burdens on public health for
seasonal epidemics [12], IAVs are also responsible for sporadic global pandemics
due to their greater genetic diversity and host range (infecting domestic animals,
pigs, poultry, and wild birds, while IBVs infect almost exclusively humans): all
known influenza pandemics were caused by IAVs, usually from zoonotic origin [4].
To this date, 18 HA and 11 NA subtypes were identified for IAVs, while only two
antigenic lineages are reported for IBVs. HA plays a critical role in species re-
striction: human influenza viruses have HAs specific to α2–6 terminal sialic acid
(SA) while avian HAs bind to α2–3 SA [2]. Influenza viruses undergo frequent
mutations as viral polymerase lacks proofreading activity, around one introduced
error per replicated genome [13]. When these mutations occur in the antigenic
portions of the HA and NA surface proteins, it may result in advantages that allow
some strains to escape pre-existing immunity, a process called antigenic drift.
Additionally, as the influenza genome is composed of discrete segments, coinfec-
tion of a same host cell with two different viruses may result in virions that contain
genome segments from both parental strains. This process, named antigenic shift, is
critical in pandemic formation as one single event is able to result in significant
antigenic modifications that allows, for example, the virus to jump from one species
to another eventually infecting humans [7]. A pandemic occurs when a new in-
fluenza strain, containing antigens that are significantly different from previous
viruses and to which humans have no or little immunity, appears and spreads, being
able to contaminate a significant percentage of the population [2,4].
9.3
THE ANNUAL CYCLE FOR INFLUENZA VACCINE
MANUFACTURING
Due to the high mutation rate of influenza viruses, a continuous surveillance of
worldwide influenza activity must be conducted in order to assure a good match
between seasonal vaccines and circulating strains, as well as to increase pre-
paredness for future pandemics. The Global Influenza Surveillance and Response
System (GISRS), coordinated by the World Health Organization since 1952, is
responsible for monitoring, isolation, and identification of influenza viruses causing
localized epidemics throughout the year. Samples from influenza patients collected
from around the world are sent to one of the more than 150 National Influenza
Centers for strain isolation and identification. Once a new strain is detected, it is
sent to one of the WHO’s reference laboratories for further antigenic and molecular
analysis. Twice a year, the WHO will carefully review the data generated and
announce the four influenza strains that are likely to circulate in the next flu season
for Northern and Southern Hemispheres [14]. From the time of this announcement,
Manufacturing of influenza vaccines
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